Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramic acid 6-phosphate etherase | SAMN04488094_101144 | Not Available | Negative | 150611 - 151495 | 29507.7 |
| glucosamine kinase | SAMN04488094_101145 | Not Available | Positive | 151661 - 152542 | 29883.6 |
| transcriptional regulator, gntr family | SAMN04488094_101146 | Not Available | Positive | 152539 - 153312 | 28621.2 |
| glutamine--fructose-6-phosphate transaminase | SAMN04488094_101147 | Not Available | Positive | 153309 - 154334 | 35826.9 |
| n-acetylglucosamine 6-phosphate deacetylase | SAMN04488094_101148 | Not Available | Positive | 154331 - 155479 | 39265.9 |
| hypothetical protein | SAMN04488094_101149 | Not Available | Negative | 155528 - 155947 | 15168.0 |
| peroxiredoxin | SAMN04488094_101150 | Not Available | Negative | 156125 - 156652 | 19141.0 |
| hypothetical protein | SAMN04488094_101151 | Not Available | Negative | 156693 - 156854 | 5546.09 |
| amidase | SAMN04488094_101152 | Not Available | Negative | 156851 - 158221 | 48048.2 |
| trap transporter, dctm subunit | SAMN04488094_101153 | Not Available | Negative | 158226 - 159644 | 51974.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
