Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide transport system substrate-binding protein | SAMN04488094_111179 | Not Available | Negative | 3580220 - 3581812 | 59063.5 |
| atp-dependent clp protease adaptor protein clps | SAMN04488094_111180 | Not Available | Negative | 3582041 - 3582382 | 13075.8 |
| putative hydrolase of the had superfamily | SAMN04488094_111181 | Not Available | Positive | 3582492 - 3583190 | 26082.2 |
| d-alanyl-d-alanine carboxypeptidase | SAMN04488094_111182 | Not Available | Positive | 3583372 - 3584853 | 52371.9 |
| succinate dehydrogenase subunit b | SAMN04488094_1121 | Not Available | Negative | 3585589 - 3586368 | 29593.7 |
| hypothetical protein | SAMN04488094_1122 | Not Available | Negative | 3586449 - 3586865 | 14951.2 |
| succinate dehydrogenase subunit a | SAMN04488094_1123 | Not Available | Negative | 3586865 - 3588670 | 65171.9 |
| succinate dehydrogenase subunit d | SAMN04488094_1124 | Not Available | Negative | 3588691 - 3589083 | 14677.3 |
| succinate dehydrogenase subunit c | SAMN04488094_1125 | Not Available | Negative | 3589097 - 3589492 | 14575.3 |
| iron (metal) dependent repressor, dtxr family | SAMN04488094_1126 | Not Available | Negative | 3589719 - 3590075 | 13097.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
