Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxybenzoate polyprenyltransferase | SAMN04488094_111159 | Not Available | Positive | 3562132 - 3563127 | 36367.6 |
| ompa-ompf porin, oop family | SAMN04488094_111160 | Not Available | Positive | 3563278 - 3565251 | 69230.0 |
| hypothetical protein | SAMN04488094_111161 | Not Available | Positive | 3565248 - 3565577 | 12677.0 |
| molybdopterin synthase subunit moae | SAMN04488094_111162 | Not Available | Negative | 3565742 - 3566182 | 15899.8 |
| molybdopterin synthase subunit moad | SAMN04488094_111163 | Not Available | Negative | 3566183 - 3566431 | 9187.91 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | SAMN04488094_111164 | Not Available | Negative | 3566436 - 3567038 | 21483.8 |
| excinuclease abc subunit c | SAMN04488094_111165 | Not Available | Negative | 3567126 - 3569018 | 69510.9 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488094_111166 | Not Available | Negative | 3569324 - 3570109 | 27789.1 |
| cation:h+ antiporter | SAMN04488094_111167 | Not Available | Negative | 3570134 - 3571111 | 33830.6 |
| signal peptide peptidase sppa | SAMN04488094_111168 | Not Available | Negative | 3571304 - 3572098 | 28638.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
