Tropicimonas isoalkanivorans strain DSM 19548

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Tropicimonas

Description

Tropicimonas isoalkanivorans strain DSM 19548 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain is mesophilic, with an optimal growth temperature of 37°C, indicating its preference for moderate temperature environments. It possesses a single replicon, which is relevant for its genetic stability and replication processes. The strain is cataloged under the accession number FOLG00000000.1, which facilitates its identification and classification in microbial databases. Its aerobic nature suggests that it relies on oxygen for metabolic processes, which is a key characteristic for understanding its ecological role. In a broader biological context, the characteristics of Tropicimonas isoalkanivorans, particularly its mesophilic nature and aerobic metabolism, may imply its adaptation to specific environmental niches where oxygen is available, such as soil or aquatic ecosystems. The ability to thrive at 37°C could also indicate its potential interactions with other organisms in warmer habitats, possibly influencing nutrient cycling and energy flow within those environments. Further research into its ecological role could provide insights into its contributions to microbial communities and ecosystem function.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusTropicimonas
SpeciesTropicimonas isoalkanivorans
Strainstrain DSM 19548

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tropicimonas isoalkanivorans strain DSM 19548 genome assembly,

Gene Summary

Adenine Count

883330 bp

Thymine Count

875776 bp

Guanine Count

1590237 bp

Cytosine Count

1626123 bp

Genome Length

4976641 bp

Protein-coding Genes

4685 genes

Non-Coding Genes

175 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-diphosphocytidyl-2-c-methyl-d-erythritol kinaseSAMN04488094_111129Not AvailableNegative3532715 - 353354829138.2
tetratricopeptide repeat-containing proteinSAMN04488094_111130Not AvailableNegative3533538 - 353525362032.8
electron-transferring-flavoprotein dehydrogenaseSAMN04488094_111131Not AvailableNegative3535399 - 353705159219.1
transcription elongation factor greaSAMN04488094_111132Not AvailablePositive3537129 - 353774022452.9
hypothetical proteinSAMN04488094_111133Not AvailablePositive3537759 - 353879937819.3
acetyltransferase (gnat) family proteinSAMN04488094_111134Not AvailableNegative3538803 - 353939021522.3
predicted branched-chain amino acid permease (azaleucine resistance)SAMN04488094_111135Not AvailablePositive3539518 - 354023124945.1
branched-chain amino acid transport proteinSAMN04488094_111136Not AvailablePositive3540228 - 354055711567.5
hypothetical proteinSAMN04488094_111137Not AvailableNegative3540546 - 354124425662.3
aa3 type cytochrome c oxidase subunit ivSAMN04488094_111138Not AvailableNegative3541274 - 35414144882.93

Displaying genes 3431 – 3440 of 4860 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.