Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMN04488094_111129 | Not Available | Negative | 3532715 - 3533548 | 29138.2 |
| tetratricopeptide repeat-containing protein | SAMN04488094_111130 | Not Available | Negative | 3533538 - 3535253 | 62032.8 |
| electron-transferring-flavoprotein dehydrogenase | SAMN04488094_111131 | Not Available | Negative | 3535399 - 3537051 | 59219.1 |
| transcription elongation factor grea | SAMN04488094_111132 | Not Available | Positive | 3537129 - 3537740 | 22452.9 |
| hypothetical protein | SAMN04488094_111133 | Not Available | Positive | 3537759 - 3538799 | 37819.3 |
| acetyltransferase (gnat) family protein | SAMN04488094_111134 | Not Available | Negative | 3538803 - 3539390 | 21522.3 |
| predicted branched-chain amino acid permease (azaleucine resistance) | SAMN04488094_111135 | Not Available | Positive | 3539518 - 3540231 | 24945.1 |
| branched-chain amino acid transport protein | SAMN04488094_111136 | Not Available | Positive | 3540228 - 3540557 | 11567.5 |
| hypothetical protein | SAMN04488094_111137 | Not Available | Negative | 3540546 - 3541244 | 25662.3 |
| aa3 type cytochrome c oxidase subunit iv | SAMN04488094_111138 | Not Available | Negative | 3541274 - 3541414 | 4882.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
