Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhodanese-related sulfurtransferase | SAMN04488094_111119 | Not Available | Negative | 3524930 - 3525298 | 12762.4 |
| dna-3-methyladenine glycosylase i | SAMN04488094_111120 | Not Available | Negative | 3525366 - 3525938 | 21127.1 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN04488094_111121 | Not Available | Positive | 3526026 - 3526904 | 32369.1 |
| acetyl-coa acetyltransferase | SAMN04488094_111122 | Not Available | Positive | 3527272 - 3528447 | 41107.1 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | SAMN04488094_111123 | Not Available | Positive | 3528613 - 3529335 | 25281.2 |
| eama domain-containing membrane protein rard | SAMN04488094_111124 | Not Available | Positive | 3529446 - 3530339 | 30054.3 |
| hypothetical protein | SAMN04488094_111125 | Not Available | Negative | 3530314 - 3530484 | 6436.77 |
| trna1(val) a37 n6-methylase trmn6 | SAMN04488094_111126 | Not Available | Negative | 3530576 - 3531373 | 28386.3 |
| putative signal transducing protein | SAMN04488094_111127 | Not Available | Negative | 3531375 - 3531620 | 9051.89 |
| octaprenyl-diphosphate synthase | SAMN04488094_111128 | Not Available | Positive | 3531653 - 3532654 | 36167.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
