Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparagine synthase (glutamine-hydrolysing) | SAMN04488094_111109 | Not Available | Negative | 3510708 - 3512549 | 68597.1 |
| malate synthase | SAMN04488094_111110 | Not Available | Negative | 3512623 - 3514893 | 82162.8 |
| putative membrane protein | SAMN04488094_111111 | Not Available | Negative | 3515077 - 3516090 | 35358.5 |
| hypothetical protein | SAMN04488094_111112 | Not Available | Negative | 3516179 - 3517633 | 53266.7 |
| trna pseudouridine38-40 synthase | SAMN04488094_111113 | Not Available | Positive | 3517836 - 3518618 | 29081.7 |
| tigr02302 family protein | SAMN04488094_111114 | Not Available | Negative | 3518706 - 3521279 | 94329.0 |
| diaminopimelate decarboxylase | SAMN04488094_111115 | Not Available | Negative | 3521329 - 3522597 | 45429.3 |
| hypothetical protein | SAMN04488094_111116 | Not Available | Negative | 3522698 - 3522883 | 5986.33 |
| argininosuccinate lyase | SAMN04488094_111117 | Not Available | Negative | 3522880 - 3524280 | 50267.8 |
| peroxiredoxin | SAMN04488094_111118 | Not Available | Positive | 3524304 - 3524861 | 20111.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
