Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multicopper oxidase with three cupredoxin domains (includes cell division protein ftsp and spore coat protein cota) | SAMN04488094_11199 | Not Available | Positive | 3499324 - 3500697 | 49839.6 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN04488094_111100 | Not Available | Positive | 3500694 - 3501152 | 16103.7 |
| 2-hydroxychromene-2-carboxylate isomerase | SAMN04488094_111101 | Not Available | Negative | 3501611 - 3502198 | 21824.0 |
| lysr family transcriptional regulator, hydrogen peroxide-inducible genes activator | SAMN04488094_111102 | Not Available | Negative | 3502382 - 3503224 | 30362.3 |
| catalase-peroxidase | SAMN04488094_111103 | Not Available | Positive | 3503506 - 3505680 | 80087.9 |
| uncharacterised nucleotidyltransferase | SAMN04488094_111104 | Not Available | Positive | 3505943 - 3506992 | 38254.1 |
| atp-binding cassette, subfamily b, msba | SAMN04488094_111105 | Not Available | Positive | 3506989 - 3508665 | 60024.2 |
| transglutaminase-like superfamily protein | SAMN04488094_111106 | Not Available | Positive | 3508652 - 3509122 | 17165.7 |
| coenzyme pqq synthesis protein d (pqqd) | SAMN04488094_111107 | Not Available | Negative | 3509139 - 3509426 | 10359.2 |
| hypothetical protein | SAMN04488094_111108 | Not Available | Negative | 3509452 - 3510396 | 33932.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
