Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase a | SAMN04488094_11179 | Not Available | Negative | 3478909 - 3480453 | 57998.2 |
| nitt/taut family transport system substrate-binding protein | SAMN04488094_11180 | Not Available | Negative | 3480515 - 3481471 | 34360.9 |
| nitt/taut family transport system atp-binding protein | SAMN04488094_11181 | Not Available | Negative | 3481508 - 3482284 | 28605.6 |
| nitt/taut family transport system permease protein | SAMN04488094_11182 | Not Available | Negative | 3482288 - 3483085 | 29139.1 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN04488094_11183 | Not Available | Negative | 3483105 - 3484247 | 39770.2 |
| transposase is116/is110/is902 family protein | SAMN04488094_11184 | Not Available | Positive | 3484466 - 3484696 | 7846.72 |
| transposase domain | SAMN04488094_11185 | Not Available | Positive | 3484786 - 3485178 | 14774.0 |
| nad(p)h dehydrogenase (quinone) | SAMN04488094_11186 | Not Available | Negative | 3485274 - 3486167 | 30882.7 |
| aromatic ring-opening dioxygenase, catalytic subunit, ligb family | SAMN04488094_11187 | Not Available | Negative | 3486197 - 3487009 | 29566.1 |
| transcriptional regulator, hxlr family | SAMN04488094_11188 | Not Available | Positive | 3487137 - 3487487 | 12940.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
