Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m15 | SAMN04488094_11169 | Not Available | Positive | 3468478 - 3468807 | 12222.7 |
| hypothetical protein | SAMN04488094_11170 | Not Available | Positive | 3468861 - 3469637 | 29022.7 |
| wg containing repeat-containing protein | SAMN04488094_11171 | Not Available | Positive | 3469725 - 3470891 | 42209.2 |
| putative tricarboxylic transport membrane protein | SAMN04488094_11172 | Not Available | Negative | 3471400 - 3472908 | 51930.1 |
| tripartite tricarboxylate transporter tctb family protein | SAMN04488094_11173 | Not Available | Negative | 3472919 - 3473410 | 17112.5 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN04488094_11174 | Not Available | Negative | 3473464 - 3474459 | 35707.1 |
| arylsulfatase a | SAMN04488094_11175 | Not Available | Negative | 3474456 - 3475997 | 58916.9 |
| dna-binding transcriptional regulator, lysr family | SAMN04488094_11176 | Not Available | Positive | 3476088 - 3476990 | 33088.8 |
| hypothetical protein | SAMN04488094_11177 | Not Available | Positive | 3477194 - 3477595 | 14330.9 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN04488094_11178 | Not Available | Negative | 3477705 - 3478787 | 39922.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
