Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_11159 | Not Available | Positive | 3457077 - 3458018 | 33246.3 |
| hypothetical protein | SAMN04488094_11160 | Not Available | Positive | 3458018 - 3458455 | 15511.4 |
| hypothetical protein | SAMN04488094_11161 | Not Available | Positive | 3458518 - 3458694 | 5937.41 |
| phage tail tape measure protein, lambda family | SAMN04488094_11162 | Not Available | Positive | 3458675 - 3461092 | 82041.8 |
| tigr02217 family protein | SAMN04488094_11163 | Not Available | Positive | 3461092 - 3461718 | 22392.2 |
| phage conserved hypothetical protein br0599 | SAMN04488094_11164 | Not Available | Positive | 3461715 - 3462599 | 31517.8 |
| putative phage cell wall peptidase, nlpc/p60 family | SAMN04488094_11165 | Not Available | Positive | 3462596 - 3463042 | 16337.8 |
| putative phage tail protein | SAMN04488094_11166 | Not Available | Positive | 3463052 - 3467017 | 141343.0 |
| c1q domain-containing protein | SAMN04488094_11167 | Not Available | Positive | 3467025 - 3468101 | 38150.6 |
| hypothetical protein | SAMN04488094_11168 | Not Available | Positive | 3468114 - 3468404 | 10290.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
