Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylglyoxal synthase | SAMN04488094_1119 | Not Available | Negative | 3409527 - 3409949 | 14827.8 |
| hypothetical protein | SAMN04488094_11110 | Not Available | Positive | 3410189 - 3410623 | 16089.2 |
| malonyl-coa decarboxylase | SAMN04488094_11111 | Not Available | Positive | 3410664 - 3411992 | 48871.1 |
| acetate kinase | SAMN04488094_11112 | Not Available | Negative | 3412035 - 3413189 | 40982.2 |
| glycerol-3-phosphate dehydrogenase (nad(p)+) | SAMN04488094_11113 | Not Available | Negative | 3413393 - 3414505 | 38627.4 |
| membrane protein | SAMN04488094_11114 | Not Available | Positive | 3414743 - 3415720 | 34446.7 |
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMN04488094_11115 | Not Available | Positive | 3415792 - 3417090 | 46690.1 |
| aldo/keto reductase | SAMN04488094_11116 | Not Available | Negative | 3417141 - 3417911 | 27840.3 |
| Trna-ser | Not Available | Not Available | Positive | 3418204 - 3418293 | Not Available |
| hypothetical protein | SAMN04488094_11118 | Not Available | Negative | 3418559 - 3419275 | 27999.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
