Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage terminase large subunit (gpa) | SAMN04488094_110175 | Not Available | Positive | 3401637 - 3402635 | 37245.0 |
| hypothetical protein | SAMN04488094_110176 | Not Available | Negative | 3402701 - 3403004 | 11427.8 |
| transposase, is4 family | SAMN04488094_1111 | Not Available | Positive | 3403005 - 3403323 | 12479.4 |
| quinol monooxygenase ygin | SAMN04488094_1112 | Not Available | Negative | 3404322 - 3404609 | 11056.2 |
| protein of unknown function | SAMN04488094_1113 | Not Available | Positive | 3404866 - 3405573 | 25054.8 |
| mlta-interacting protein mipa | SAMN04488094_1114 | Not Available | Negative | 3405580 - 3406419 | 30198.3 |
| cytochrome c | SAMN04488094_1115 | Not Available | Negative | 3406558 - 3406962 | 13976.8 |
| cytochrome c | SAMN04488094_1116 | Not Available | Negative | 3406965 - 3407372 | 13511.2 |
| lipoprotein-releasing system atp-binding protein | SAMN04488094_1117 | Not Available | Negative | 3407434 - 3408117 | 23612.5 |
| lipoprotein-releasing system permease protein | SAMN04488094_1118 | Not Available | Negative | 3408110 - 3409396 | 46457.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
