Tropicimonas isoalkanivorans strain DSM 19548

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Tropicimonas

Description

Tropicimonas isoalkanivorans strain DSM 19548 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain is mesophilic, with an optimal growth temperature of 37°C, indicating its preference for moderate temperature environments. It possesses a single replicon, which is relevant for its genetic stability and replication processes. The strain is cataloged under the accession number FOLG00000000.1, which facilitates its identification and classification in microbial databases. Its aerobic nature suggests that it relies on oxygen for metabolic processes, which is a key characteristic for understanding its ecological role. In a broader biological context, the characteristics of Tropicimonas isoalkanivorans, particularly its mesophilic nature and aerobic metabolism, may imply its adaptation to specific environmental niches where oxygen is available, such as soil or aquatic ecosystems. The ability to thrive at 37°C could also indicate its potential interactions with other organisms in warmer habitats, possibly influencing nutrient cycling and energy flow within those environments. Further research into its ecological role could provide insights into its contributions to microbial communities and ecosystem function.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusTropicimonas
SpeciesTropicimonas isoalkanivorans
Strainstrain DSM 19548

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tropicimonas isoalkanivorans strain DSM 19548 genome assembly,

Gene Summary

Adenine Count

883330 bp

Thymine Count

875776 bp

Guanine Count

1590237 bp

Cytosine Count

1626123 bp

Genome Length

4976641 bp

Protein-coding Genes

4685 genes

Non-Coding Genes

175 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phage terminase large subunit (gpa)SAMN04488094_110175Not AvailablePositive3401637 - 340263537245.0
hypothetical proteinSAMN04488094_110176Not AvailableNegative3402701 - 340300411427.8
transposase, is4 familySAMN04488094_1111Not AvailablePositive3403005 - 340332312479.4
quinol monooxygenase yginSAMN04488094_1112Not AvailableNegative3404322 - 340460911056.2
protein of unknown functionSAMN04488094_1113Not AvailablePositive3404866 - 340557325054.8
mlta-interacting protein mipaSAMN04488094_1114Not AvailableNegative3405580 - 340641930198.3
cytochrome cSAMN04488094_1115Not AvailableNegative3406558 - 340696213976.8
cytochrome cSAMN04488094_1116Not AvailableNegative3406965 - 340737213511.2
lipoprotein-releasing system atp-binding proteinSAMN04488094_1117Not AvailableNegative3407434 - 340811723612.5
lipoprotein-releasing system permease proteinSAMN04488094_1118Not AvailableNegative3408110 - 340939646457.6

Displaying genes 3331 – 3340 of 4860 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.