Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha amylase, catalytic domain | SAMN04488094_110165 | Not Available | Negative | 3388007 - 3388939 | 35195.1 |
| hypothetical protein | SAMN04488094_110166 | Not Available | Positive | 3389568 - 3389828 | 9361.26 |
| hypothetical protein | SAMN04488094_110167 | Not Available | Negative | 3389744 - 3389974 | 7784.5 |
| hypothetical protein | SAMN04488094_110168 | Not Available | Positive | 3390176 - 3390781 | 22870.4 |
| pts system, fructose-specific iic component | SAMN04488094_110169 | Not Available | Negative | 3390959 - 3392767 | 61003.0 |
| 1-phosphofructokinase | SAMN04488094_110170 | Not Available | Negative | 3392764 - 3393726 | 32431.8 |
| phosphocarrier protein fpr | SAMN04488094_110171 | Not Available | Negative | 3393739 - 3396213 | 87086.2 |
| multiple sugar transport system substrate-binding protein | SAMN04488094_110172 | Not Available | Positive | 3396294 - 3397733 | 52119.6 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04488094_110173 | Not Available | Positive | 3397730 - 3400426 | 95524.3 |
| two-component system, ompr family, response regulator | SAMN04488094_110174 | Not Available | Negative | 3400393 - 3401106 | 26052.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
