Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN04488094_110155 | Not Available | Negative | 3376378 - 3377886 | 55239.0 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN04488094_110156 | Not Available | Negative | 3377987 - 3378940 | 33859.9 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488094_110157 | Not Available | Negative | 3379408 - 3380184 | 27444.8 |
| ribose transport system permease protein | SAMN04488094_110158 | Not Available | Negative | 3380203 - 3381156 | 31995.4 |
| ribose transport system atp-binding protein | SAMN04488094_110159 | Not Available | Negative | 3381153 - 3382658 | 54664.0 |
| ribose transport system permease protein | SAMN04488094_110160 | Not Available | Negative | 3382655 - 3383581 | 31196.4 |
| ribose transport system substrate-binding protein | SAMN04488094_110161 | Not Available | Negative | 3383740 - 3384816 | 38052.8 |
| d-xylulose reductase | SAMN04488094_110162 | Not Available | Positive | 3384941 - 3385978 | 36129.4 |
| transcriptional regulator, laci family | SAMN04488094_110163 | Not Available | Positive | 3386012 - 3387037 | 37630.1 |
| alpha amylase, catalytic domain | SAMN04488094_110164 | Not Available | Negative | 3387287 - 3387919 | 23258.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
