Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_110145 | Not Available | Positive | 3362336 - 3362641 | 11646.2 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN04488094_110146 | Not Available | Positive | 3362645 - 3363742 | 39905.9 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN04488094_110147 | Not Available | Positive | 3363735 - 3364730 | 36190.4 |
| dihydroxyacetone kinase | SAMN04488094_110148 | Not Available | Positive | 3364742 - 3366364 | 56060.9 |
| cardiolipin synthase | SAMN04488094_110149 | Not Available | Positive | 3366547 - 3367974 | 52673.5 |
| ig-like domain (group 3) | SAMN04488094_110150 | Not Available | Positive | 3368379 - 3372260 | 134033.0 |
| eama domain-containing membrane protein rard | SAMN04488094_110151 | Not Available | Negative | 3372388 - 3373272 | 31823.1 |
| transcriptional regulator, gntr family | SAMN04488094_110152 | Not Available | Negative | 3373618 - 3374397 | 28768.7 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN04488094_110153 | Not Available | Negative | 3374343 - 3375335 | 34817.6 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN04488094_110154 | Not Available | Negative | 3375332 - 3376381 | 36072.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
