Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_110135 | Not Available | Positive | 3353162 - 3353407 | 8708.23 |
| n-acyl-l-homoserine lactone synthetase | SAMN04488094_110136 | Not Available | Negative | 3353600 - 3354232 | 23075.6 |
| transcriptional regulator, luxr family | SAMN04488094_110137 | Not Available | Negative | 3354332 - 3354961 | 23600.2 |
| luxr family transcriptional regulator | SAMN04488094_110138 | Not Available | Positive | 3355077 - 3355571 | 18766.1 |
| hypothetical protein | SAMN04488094_110139 | Not Available | Negative | 3356369 - 3356767 | 14109.0 |
| hypothetical protein | SAMN04488094_110140 | Not Available | Positive | 3357269 - 3357919 | 24266.3 |
| transcriptional regulator, laci family | SAMN04488094_110141 | Not Available | Negative | 3357828 - 3358859 | 37776.4 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN04488094_110142 | Not Available | Positive | 3359034 - 3360350 | 48435.1 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN04488094_110143 | Not Available | Positive | 3360457 - 3361404 | 35821.1 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN04488094_110144 | Not Available | Positive | 3361401 - 3362339 | 34285.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
