Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04488094_110125 | Not Available | Positive | 3343444 - 3344829 | 50468.9 |
| hypothetical protein | SAMN04488094_110126 | Not Available | Positive | 3344902 - 3345231 | 11173.3 |
| bnr/asp-box repeat-containing protein | SAMN04488094_110127 | Not Available | Positive | 3345316 - 3346242 | 31604.4 |
| uncharacterized conserved protein | SAMN04488094_110128 | Not Available | Positive | 3346254 - 3346673 | 14433.3 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN04488094_110129 | Not Available | Positive | 3346726 - 3347175 | 16007.9 |
| transcriptional regulator, iclr family | SAMN04488094_110130 | Not Available | Negative | 3347308 - 3348093 | 28745.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN04488094_110131 | Not Available | Positive | 3348223 - 3349203 | 33322.2 |
| tripartite tricarboxylate transporter tctb family protein | SAMN04488094_110132 | Not Available | Positive | 3349258 - 3349692 | 14727.6 |
| tcta family transporter | SAMN04488094_110133 | Not Available | Positive | 3349696 - 3351198 | 52162.7 |
| fad dependent oxidoreductase | SAMN04488094_110134 | Not Available | Negative | 3351275 - 3352924 | 60388.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
