Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh:flavin oxidoreductase / nadh oxidase family protein | SAMN04488094_110114 | Not Available | Positive | 3332784 - 3333554 | 28435.9 |
| nucleoside-diphosphate-sugar epimerase | SAMN04488094_110115 | Not Available | Positive | 3333721 - 3334617 | 33137.0 |
| hypothetical protein | SAMN04488094_110116 | Not Available | Positive | 3334917 - 3335384 | 17369.0 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488094_110117 | Not Available | Negative | 3335296 - 3337041 | 63509.9 |
| cu+-exporting atpase | SAMN04488094_110118 | Not Available | Positive | 3337648 - 3339975 | 81665.1 |
| cobalt transporter subunit cbta | SAMN04488094_110119 | Not Available | Negative | 3340019 - 3340702 | 23676.1 |
| cobalt transporter subunit cbtb | SAMN04488094_110120 | Not Available | Negative | 3340706 - 3340882 | 6124.6 |
| hypothetical protein | SAMN04488094_110122 | Not Available | Negative | 3341409 - 3341738 | 10947.1 |
| ef hand | SAMN04488094_110123 | Not Available | Negative | 3341802 - 3342551 | 25090.8 |
| two component transcriptional regulator, winged helix family | SAMN04488094_110124 | Not Available | Positive | 3342725 - 3343447 | 27061.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
