Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative tricarboxylic transport membrane protein | SAMN04488094_110104 | Not Available | Positive | 3321727 - 3322215 | 17139.3 |
| putative tricarboxylic transport membrane protein | SAMN04488094_110105 | Not Available | Positive | 3322215 - 3323723 | 52212.3 |
| hypothetical protein | SAMN04488094_110106 | Not Available | Negative | 3323772 - 3324863 | 38462.9 |
| transcriptional regulator, laci family | SAMN04488094_110107 | Not Available | Negative | 3325232 - 3326218 | 35827.8 |
| d-ribose pyranase | SAMN04488094_110108 | Not Available | Negative | 3326788 - 3327198 | 14491.9 |
| ribose transport system permease protein | SAMN04488094_110109 | Not Available | Negative | 3327195 - 3328193 | 34837.8 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN04488094_110110 | Not Available | Negative | 3328190 - 3329752 | 56560.1 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN04488094_110111 | Not Available | Negative | 3329831 - 3330754 | 32327.5 |
| transcriptional regulator, tetr family | SAMN04488094_110112 | Not Available | Negative | 3331147 - 3331650 | 17637.0 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488094_110113 | Not Available | Positive | 3331748 - 3332515 | 26653.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
