Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease, rne/rng family | SAMN04488094_11094 | Not Available | Positive | 3311352 - 3312395 | 37169.5 |
| hypothetical protein | SAMN04488094_11095 | Not Available | Positive | 3312392 - 3312571 | 6734.91 |
| Trna-phe | Not Available | Not Available | Positive | 3312651 - 3312725 | Not Available |
| atp-dependent rna helicase dead | SAMN04488094_11097 | Not Available | Positive | 3312874 - 3314808 | 70222.9 |
| helix-turn-helix domain-containing protein | SAMN04488094_11098 | Not Available | Negative | 3315150 - 3316202 | 38581.8 |
| protein of unknown function | SAMN04488094_11099 | Not Available | Positive | 3316241 - 3317299 | 38321.3 |
| protein of unknown function | SAMN04488094_110100 | Not Available | Positive | 3317317 - 3318318 | 35940.7 |
| tannase and feruloyl esterase | SAMN04488094_110101 | Not Available | Positive | 3318426 - 3318905 | 17591.3 |
| phosphoenolpyruvate phosphomutase | SAMN04488094_110102 | Not Available | Negative | 3319565 - 3320434 | 30845.2 |
| putative tricarboxylic transport membrane protein | SAMN04488094_110103 | Not Available | Positive | 3320671 - 3321642 | 34123.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
