Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SAMN04488094_11084 | Not Available | Positive | 3302902 - 3304173 | 44751.4 |
| protein of unknown function | SAMN04488094_11085 | Not Available | Positive | 3304166 - 3304642 | 17442.7 |
| wd40-like beta propeller repeat | SAMN04488094_11086 | Not Available | Negative | 3304683 - 3306386 | 59107.0 |
| histidinol dehydrogenase | SAMN04488094_11087 | Not Available | Positive | 3306736 - 3308046 | 46429.9 |
| uncharacterized protein, upf0262 family | SAMN04488094_11088 | Not Available | Positive | 3308043 - 3308528 | 18338.0 |
| protein tyrosine phosphatase | SAMN04488094_11089 | Not Available | Positive | 3308532 - 3308996 | 17428.6 |
| n-acetylglutamate synthase, gnat family | SAMN04488094_11090 | Not Available | Positive | 3308993 - 3309580 | 21549.5 |
| predicted amidohydrolase | SAMN04488094_11091 | Not Available | Positive | 3309577 - 3310479 | 31696.8 |
| bacterial translation initiation factor 1 (bif-1) | SAMN04488094_11092 | Not Available | Positive | 3310550 - 3310768 | 8358.29 |
| septum formation protein | SAMN04488094_11093 | Not Available | Positive | 3310777 - 3311355 | 20532.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
