Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, rpir family | SAMN04488094_11074 | Not Available | Negative | 3290679 - 3291545 | 32187.7 |
| spermidine/putrescine transport system substrate-binding protein | SAMN04488094_11075 | Not Available | Positive | 3291658 - 3292695 | 37734.5 |
| spermidine/putrescine transport system atp-binding protein | SAMN04488094_11076 | Not Available | Positive | 3292765 - 3293826 | 38576.6 |
| spermidine/putrescine transport system permease protein | SAMN04488094_11077 | Not Available | Positive | 3293823 - 3294707 | 32842.5 |
| spermidine/putrescine transport system permease protein | SAMN04488094_11078 | Not Available | Positive | 3294707 - 3295522 | 30053.6 |
| l-aminopeptidase dmpa. serine peptidase. merops family s58 | SAMN04488094_11079 | Not Available | Positive | 3295527 - 3296633 | 39105.9 |
| pyruvate dehydrogenase e1 component | SAMN04488094_11080 | Not Available | Negative | 3296639 - 3299011 | 86521.8 |
| transcriptional regulator, asnc family | SAMN04488094_11081 | Not Available | Positive | 3299153 - 3299605 | 17139.5 |
| di-and tricarboxylate transporter | SAMN04488094_11082 | Not Available | Positive | 3299907 - 3301682 | 63741.4 |
| Trna-thr | Not Available | Not Available | Positive | 3302510 - 3302584 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
