Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN04488094_11064 | Not Available | Positive | 3277258 - 3278343 | 38351.5 |
| dihydroxyacetone kinase, n-terminal domain | SAMN04488094_11065 | Not Available | Positive | 3278867 - 3279859 | 34565.2 |
| dihydroxyacetone kinase, c-terminal domain | SAMN04488094_11066 | Not Available | Positive | 3279875 - 3280513 | 21737.8 |
| dihydroxyacetone kinase, c-terminal domain | SAMN04488094_11067 | Not Available | Positive | 3280553 - 3281197 | 21898.9 |
| dihydroxyacetone kinase, n-terminal domain | SAMN04488094_11068 | Not Available | Positive | 3281197 - 3283248 | 72245.7 |
| hypothetical protein | SAMN04488094_11069 | Not Available | Negative | 3283279 - 3284841 | 57177.8 |
| 50s ribosome-binding gtpase | SAMN04488094_11070 | Not Available | Negative | 3284828 - 3285907 | 38386.8 |
| bon domain-containing protein | SAMN04488094_11071 | Not Available | Negative | 3286046 - 3287221 | 40779.3 |
| fad/fmn-containing dehydrogenase | SAMN04488094_11072 | Not Available | Negative | 3287479 - 3288849 | 48735.1 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN04488094_11073 | Not Available | Negative | 3289149 - 3290258 | 38693.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
