Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazolonepropionase | SAMN04488094_11054 | Not Available | Negative | 3265030 - 3266223 | 41532.4 |
| amidohydrolase family protein | SAMN04488094_11055 | Not Available | Positive | 3266292 - 3267656 | 48927.8 |
| transcriptional regulator, gntr family | SAMN04488094_11056 | Not Available | Positive | 3267653 - 3268351 | 26069.2 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN04488094_11057 | Not Available | Positive | 3268440 - 3270005 | 57298.8 |
| amylosucrase | SAMN04488094_11058 | Not Available | Positive | 3270117 - 3272021 | 71795.2 |
| dienelactone hydrolase | SAMN04488094_11059 | Not Available | Positive | 3272124 - 3272984 | 30569.5 |
| trap transporter, dctm subunit | SAMN04488094_11060 | Not Available | Negative | 3273106 - 3274389 | 44891.1 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN04488094_11061 | Not Available | Negative | 3274386 - 3274949 | 20589.3 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN04488094_11062 | Not Available | Negative | 3275008 - 3275991 | 35336.8 |
| dna-binding transcriptional regulator, gntr family | SAMN04488094_11063 | Not Available | Negative | 3276216 - 3276899 | 25315.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
