Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative acetyltransferase | SAMN04488094_11044 | Not Available | Negative | 3255063 - 3255515 | 17018.4 |
| dna-binding transcriptional regulator, lysr family | SAMN04488094_11045 | Not Available | Negative | 3255735 - 3256631 | 33433.3 |
| hypothetical protein | SAMN04488094_11046 | Not Available | Positive | 3256728 - 3256946 | 8353.89 |
| 2-keto-3-deoxy-l-fuconate dehydrogenase | SAMN04488094_11047 | Not Available | Negative | 3256980 - 3257723 | 25912.4 |
| trap transporter, dctm subunit | SAMN04488094_11048 | Not Available | Negative | 3257841 - 3259391 | 53521.8 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN04488094_11049 | Not Available | Negative | 3259388 - 3259885 | 18575.4 |
| trap-type mannitol/chloroaromatic compound transport system, substrate-binding protein | SAMN04488094_11050 | Not Available | Negative | 3259937 - 3261022 | 39207.6 |
| urocanate hydratase | SAMN04488094_11051 | Not Available | Negative | 3261046 - 3262710 | 60504.0 |
| formiminoglutamase | SAMN04488094_11052 | Not Available | Negative | 3262707 - 3263507 | 29182.3 |
| histidine ammonia-lyase | SAMN04488094_11053 | Not Available | Negative | 3263504 - 3265033 | 53075.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
