Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN04488094_109200 | Not Available | Negative | 3205315 - 3205872 | 19589.2 |
| pas fold | SAMN04488094_109201 | Not Available | Negative | 3205897 - 3207486 | 58911.2 |
| two-component system, sensor histidine kinase regb | SAMN04488094_109202 | Not Available | Negative | 3207584 - 3208981 | 51151.4 |
| protein sco1/2 | SAMN04488094_109203 | Not Available | Positive | 3209072 - 3209698 | 22966.1 |
| two-component system, response regulator rega | SAMN04488094_109204 | Not Available | Positive | 3209801 - 3210355 | 20370.3 |
| hypothetical protein | SAMN04488094_109205 | Not Available | Positive | 3210359 - 3210751 | 13035.7 |
| hypothetical protein | SAMN04488094_109206 | Not Available | Negative | 3210746 - 3211339 | 22067.8 |
| adenosylhomocysteinase | SAMN04488094_109207 | Not Available | Positive | 3211442 - 3212836 | 50992.2 |
| hypothetical protein | SAMN04488094_1101 | Not Available | Negative | 3213077 - 3213628 | 19658.3 |
| pyridoxine 5'-phosphate synthase | SAMN04488094_1102 | Not Available | Positive | 3213761 - 3214528 | 27354.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
