Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative n6-adenine-specific dna methylase | SAMN04488094_109190 | Not Available | Positive | 3191344 - 3192453 | 39630.7 |
| trk system potassium uptake protein trkh | SAMN04488094_109191 | Not Available | Negative | 3192450 - 3193781 | 46696.3 |
| trk system potassium uptake protein trka | SAMN04488094_109192 | Not Available | Negative | 3193783 - 3194445 | 23739.8 |
| trk system potassium uptake protein trkh | SAMN04488094_109193 | Not Available | Negative | 3194546 - 3195964 | 50664.3 |
| hslv component of hsluv peptidase. threonine peptidase. merops family t01b | SAMN04488094_109194 | Not Available | Negative | 3196148 - 3196705 | 19453.4 |
| thioredoxin | SAMN04488094_109195 | Not Available | Negative | 3196891 - 3197211 | 11430.6 |
| dna helicase/exodeoxyribonuclease v, subunit a | SAMN04488094_109196 | Not Available | Negative | 3197271 - 3200660 | 122913.0 |
| double-strand break repair protein addb | SAMN04488094_109197 | Not Available | Negative | 3200657 - 3203632 | 108443.0 |
| moba-like ntp transferase domain-containing protein | SAMN04488094_109198 | Not Available | Negative | 3203625 - 3204323 | 24977.8 |
| hypothetical protein | SAMN04488094_109199 | Not Available | Negative | 3204299 - 3205318 | 36548.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
