Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secb | SAMN04488094_109180 | Not Available | Negative | 3182698 - 3183228 | 19627.2 |
| upf0716 protein fxsa | SAMN04488094_109181 | Not Available | Negative | 3183298 - 3183783 | 17857.9 |
| predicted lipid-binding transport protein, tim44 family | SAMN04488094_109182 | Not Available | Positive | 3183889 - 3184557 | 24489.3 |
| membrane-bound lytic murein transglycosylase a | SAMN04488094_109183 | Not Available | Positive | 3184554 - 3185558 | 35745.3 |
| dna-nicking endonuclease, smr domain | SAMN04488094_109184 | Not Available | Positive | 3185567 - 3186181 | 22496.2 |
| predicted arabinose efflux permease, mfs family | SAMN04488094_109185 | Not Available | Negative | 3186143 - 3187381 | 43619.4 |
| atp-dependent hsluv protease atp-binding subunit hslu | SAMN04488094_109186 | Not Available | Negative | 3187551 - 3188858 | 48427.0 |
| nad(p)h dehydrogenase (quinone) | SAMN04488094_109187 | Not Available | Negative | 3188982 - 3189830 | 29312.4 |
| transcriptional regulator, hxlr family | SAMN04488094_109188 | Not Available | Positive | 3189921 - 3190334 | 15384.5 |
| lysozyme | SAMN04488094_109189 | Not Available | Positive | 3190447 - 3191235 | 29580.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
