Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome partitioning protein | SAMN04488094_109170 | Not Available | Negative | 3172995 - 3173807 | 28736.4 |
| 16s rrna m(7)g-527 methyltransferase | SAMN04488094_109171 | Not Available | Negative | 3173800 - 3174432 | 23094.8 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme | SAMN04488094_109172 | Not Available | Negative | 3174425 - 3176287 | 67226.3 |
| trna modification gtpase trme | SAMN04488094_109173 | Not Available | Negative | 3176300 - 3177580 | 45413.9 |
| transcription termination factor rho | SAMN04488094_109174 | Not Available | Negative | 3177606 - 3178907 | 48280.0 |
| putative membrane protein | SAMN04488094_109175 | Not Available | Negative | 3179015 - 3179467 | 17356.8 |
| septum formation protein | SAMN04488094_109176 | Not Available | Positive | 3179881 - 3180492 | 22251.8 |
| shikimate dehydrogenase | SAMN04488094_109177 | Not Available | Positive | 3180489 - 3181322 | 29712.9 |
| dephospho-coa kinase | SAMN04488094_109178 | Not Available | Positive | 3181319 - 3181918 | 21518.1 |
| dna polymerase-3 subunit epsilon | SAMN04488094_109179 | Not Available | Positive | 3181903 - 3182595 | 25330.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
