Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase | SAMN04488094_109160 | Not Available | Positive | 3161015 - 3161677 | 23659.8 |
| ribokinase | SAMN04488094_109161 | Not Available | Negative | 3161798 - 3162691 | 31009.1 |
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | SAMN04488094_109162 | Not Available | Negative | 3162696 - 3164951 | 80974.7 |
| dna mismatch repair protein muts | SAMN04488094_109163 | Not Available | Positive | 3165118 - 3167763 | 95080.7 |
| molecular chaperone grpe | SAMN04488094_109164 | Not Available | Negative | 3167774 - 3168352 | 21548.4 |
| heat-inducible transcription repressor hrca | SAMN04488094_109165 | Not Available | Negative | 3168361 - 3169425 | 39039.8 |
| rnase ph | SAMN04488094_109166 | Not Available | Positive | 3169561 - 3170274 | 25221.1 |
| xtp/ditp diphosphohydrolase | SAMN04488094_109167 | Not Available | Positive | 3170275 - 3170889 | 22130.0 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN04488094_109168 | Not Available | Positive | 3170846 - 3172039 | 43501.4 |
| chromosome partitioning protein, parb family | SAMN04488094_109169 | Not Available | Negative | 3172060 - 3172983 | 33649.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
