Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic phosphate transporter, pit family | SAMN04488094_109140 | Not Available | Negative | 3140765 - 3142249 | 51385.9 |
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN04488094_109141 | Not Available | Negative | 3142321 - 3142785 | 17226.1 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN04488094_109142 | Not Available | Negative | 3142910 - 3144073 | 41332.3 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488094_109143 | Not Available | Positive | 3144197 - 3144925 | 25137.2 |
| ribitol 2-dehydrogenase | SAMN04488094_109144 | Not Available | Positive | 3144968 - 3145696 | 25471.7 |
| threonine dehydrogenase | SAMN04488094_109145 | Not Available | Negative | 3145769 - 3146761 | 34407.6 |
| mannitol 2-dehydrogenase | SAMN04488094_109146 | Not Available | Negative | 3146775 - 3148247 | 54044.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488094_109147 | Not Available | Negative | 3148259 - 3149038 | 27621.9 |
| d-sorbitol dehydrogenase (acceptor) | SAMN04488094_109148 | Not Available | Negative | 3149049 - 3149819 | 27080.4 |
| multiple sugar transport system atp-binding protein | SAMN04488094_109149 | Not Available | Negative | 3149816 - 3150820 | 36688.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
