Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase gamma subunit | SAMN04488094_101104 | Not Available | Negative | 105234 - 106502 | 46675.0 |
| formate dehydrogenase beta subunit | SAMN04488094_101105 | Not Available | Negative | 106594 - 107187 | 21231.2 |
| formate dehydrogenase alpha subunit | SAMN04488094_101106 | Not Available | Negative | 107199 - 110171 | 109751.0 |
| formate dehydrogenase region tat target | SAMN04488094_101107 | Not Available | Negative | 110285 - 110476 | 6387.36 |
| chaperone tord involved in molybdoenzyme tora maturation | SAMN04488094_101108 | Not Available | Negative | 110530 - 111156 | 22620.1 |
| protein of unknown function | SAMN04488094_101109 | Not Available | Negative | 111153 - 111752 | 21645.3 |
| protein of unknown function | SAMN04488094_101110 | Not Available | Negative | 111749 - 112282 | 19991.0 |
| 4fe-4s dicluster domain-containing protein | SAMN04488094_101111 | Not Available | Positive | 112654 - 114603 | 68548.2 |
| hypothetical protein | SAMN04488094_101112 | Not Available | Negative | 114597 - 115349 | 26998.5 |
| hypothetical protein | SAMN04488094_101113 | Not Available | Positive | 115406 - 115597 | 6893.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
