Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite atp-independent transporter solute receptor, dctp family | SAMN04488094_109130 | Not Available | Negative | 3128759 - 3129796 | 37035.0 |
| trap transporter, dctm subunit | SAMN04488094_109131 | Not Available | Negative | 3129956 - 3131239 | 44739.9 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN04488094_109132 | Not Available | Negative | 3131239 - 3131769 | 19652.7 |
| peptide/nickel transport system substrate-binding protein | SAMN04488094_109133 | Not Available | Negative | 3132077 - 3133654 | 57487.2 |
| peptide/nickel transport system substrate-binding protein | SAMN04488094_109134 | Not Available | Positive | 3134118 - 3135725 | 59300.2 |
| peptide/nickel transport system permease protein | SAMN04488094_109135 | Not Available | Positive | 3135913 - 3136869 | 34315.2 |
| peptide/nickel transport system permease protein | SAMN04488094_109136 | Not Available | Positive | 3136880 - 3137944 | 38029.4 |
| peptide/nickel transport system atp-binding protein | SAMN04488094_109137 | Not Available | Positive | 3137946 - 3139607 | 61279.4 |
| hypothetical protein | SAMN04488094_109138 | Not Available | Negative | 3139708 - 3139932 | 8385.25 |
| hypothetical protein | SAMN04488094_109139 | Not Available | Positive | 3140141 - 3140746 | 21732.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
