Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone dnaj | SAMN04488094_109120 | Not Available | Positive | 3117846 - 3118994 | 40940.4 |
| oxaloacetate decarboxylase, beta subunit | SAMN04488094_109121 | Not Available | Negative | 3119106 - 3120257 | 40555.0 |
| biotin carboxyl carrier protein | SAMN04488094_109122 | Not Available | Negative | 3120274 - 3120678 | 12851.2 |
| oxaloacetate decarboxylase, gamma chain | SAMN04488094_109123 | Not Available | Negative | 3120697 - 3121092 | 13481.2 |
| propionyl-coa carboxylase beta chain | SAMN04488094_109124 | Not Available | Negative | 3121108 - 3122661 | 55355.6 |
| 2-dehydro-3-deoxygluconokinase | SAMN04488094_109125 | Not Available | Positive | 3123222 - 3124136 | 31894.7 |
| succinyl-coa:acetate coa-transferase | SAMN04488094_109126 | Not Available | Negative | 3124271 - 3125779 | 54866.7 |
| zinc transporter, zip family | SAMN04488094_109127 | Not Available | Negative | 3126167 - 3126943 | 26634.2 |
| carbon-nitrogen hydrolase | SAMN04488094_109128 | Not Available | Negative | 3127125 - 3127379 | 8726.34 |
| diaminopropionate ammonia-lyase | SAMN04488094_109129 | Not Available | Negative | 3127465 - 3128685 | 43115.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
