Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| core-2/i-branching enzyme | SAMN04488094_109110 | Not Available | Negative | 3105575 - 3107275 | 64545.4 |
| glycosyl transferase family 2 | SAMN04488094_109111 | Not Available | Negative | 3107272 - 3108282 | 38974.2 |
| udp-galactose 4-epimerase | SAMN04488094_109112 | Not Available | Negative | 3108682 - 3109665 | 36062.5 |
| udp-glucose pyrophosphorylase | SAMN04488094_109113 | Not Available | Negative | 3109699 - 3110592 | 32320.8 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | SAMN04488094_109114 | Not Available | Negative | 3110803 - 3111603 | 29395.9 |
| 3'(2'),5'-bisphosphate nucleotidase | SAMN04488094_109115 | Not Available | Negative | 3111600 - 3112400 | 28672.6 |
| hypothetical protein | SAMN04488094_109116 | Not Available | Positive | 3112745 - 3113680 | 31930.7 |
| uncharacterized membrane protein | SAMN04488094_109117 | Not Available | Positive | 3113797 - 3115020 | 45439.4 |
| alkylated dna repair protein (dna oxidative demethylase) | SAMN04488094_109118 | Not Available | Negative | 3115057 - 3115689 | 23008.7 |
| molecular chaperone dnak | SAMN04488094_109119 | Not Available | Positive | 3115858 - 3117771 | 68813.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
