Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2'-5' rna ligase | SAMN04488094_10990 | Not Available | Positive | 3085607 - 3086146 | 19679.9 |
| 3-demethylubiquinone-9 3-methyltransferase | SAMN04488094_10991 | Not Available | Negative | 3086131 - 3086895 | 27668.9 |
| proline iminopeptidase | SAMN04488094_10992 | Not Available | Positive | 3086967 - 3087956 | 37161.3 |
| uncharacterized fe-s cluster protein yjdi | SAMN04488094_10993 | Not Available | Positive | 3088011 - 3088640 | 22954.9 |
| ribosome maturation factor rimp | SAMN04488094_10994 | Not Available | Positive | 3088775 - 3089374 | 22047.1 |
| nusa antitermination factor | SAMN04488094_10995 | Not Available | Positive | 3089391 - 3091073 | 62734.8 |
| hypothetical protein | SAMN04488094_10996 | Not Available | Positive | 3091100 - 3091732 | 21736.3 |
| bacterial translation initiation factor 2 (bif-2) | SAMN04488094_10997 | Not Available | Positive | 3091729 - 3094245 | 90455.7 |
| hypothetical protein | SAMN04488094_10998 | Not Available | Negative | 3094343 - 3094483 | 5137.32 |
| 8-oxo-dgtp diphosphatase | SAMN04488094_10999 | Not Available | Negative | 3094625 - 3095023 | 14920.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
