Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine phosphatase rsbu, regulator of sigma subunit | SAMN04488094_10970 | Not Available | Positive | 3067937 - 3069220 | 46943.9 |
| 8-oxo-dgtp diphosphatase | SAMN04488094_10971 | Not Available | Negative | 3069224 - 3069658 | 16455.1 |
| molecular chaperone hsp33 | SAMN04488094_10972 | Not Available | Positive | 3069736 - 3070731 | 36246.6 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04488094_10973 | Not Available | Positive | 3070718 - 3071323 | 22250.6 |
| poly(a) polymerase | SAMN04488094_10974 | Not Available | Positive | 3071323 - 3072471 | 41656.0 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN04488094_10975 | Not Available | Positive | 3072526 - 3073122 | 21228.1 |
| atp-binding cassette, subfamily b, multidrug efflux pump | SAMN04488094_10976 | Not Available | Positive | 3073237 - 3075090 | 68159.6 |
| atp-binding cassette, subfamily b | SAMN04488094_10977 | Not Available | Positive | 3075087 - 3076934 | 66363.3 |
| 23s rrna m(5)u-1939 methyltransferase | SAMN04488094_10978 | Not Available | Positive | 3076931 - 3078160 | 43349.0 |
| voltage-gated sodium channel | SAMN04488094_10979 | Not Available | Positive | 3078183 - 3079001 | 30444.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
