Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched chain amino acid aminotransferase apoenzyme | SAMN04488094_10940 | Not Available | Positive | 3040438 - 3041307 | 32077.1 |
| hypothetical protein | SAMN04488094_10941 | Not Available | Positive | 3041399 - 3041827 | 15272.4 |
| hypothetical protein | SAMN04488094_10942 | Not Available | Negative | 3041849 - 3042046 | 7286.86 |
| epoxyqueuosine reductase | SAMN04488094_10943 | Not Available | Negative | 3042138 - 3043166 | 37881.0 |
| glutathione s-transferase | SAMN04488094_10944 | Not Available | Negative | 3043278 - 3043943 | 26002.3 |
| monofunctional biosynthetic peptidoglycan transglycosylase | SAMN04488094_10945 | Not Available | Negative | 3044002 - 3044745 | 28008.9 |
| glutamate synthase (nadph) large subunit | SAMN04488094_10946 | Not Available | Negative | 3044957 - 3049495 | 164386.0 |
| hypothetical protein | SAMN04488094_10947 | Not Available | Negative | 3049482 - 3050237 | 27859.2 |
| glutamate synthase (nadph) small subunit | SAMN04488094_10948 | Not Available | Negative | 3050279 - 3051715 | 52004.5 |
| undecaprenyl-diphosphatase | SAMN04488094_10949 | Not Available | Positive | 3051935 - 3052738 | 28539.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
