Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp nucleosidase | SAMN04488094_10930 | Not Available | Negative | 3029833 - 3031317 | 55366.0 |
| adenine deaminase | SAMN04488094_10931 | Not Available | Negative | 3031314 - 3033119 | 63374.1 |
| uncharacterized protein, duf1810 family | SAMN04488094_10932 | Not Available | Positive | 3033234 - 3033671 | 16230.2 |
| nucleoside-diphosphate-sugar epimerase | SAMN04488094_10933 | Not Available | Positive | 3033974 - 3034864 | 31687.7 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN04488094_10934 | Not Available | Negative | 3034958 - 3036883 | 68415.0 |
| farnesyl-diphosphate synthase | SAMN04488094_10935 | Not Available | Negative | 3036933 - 3037805 | 29808.5 |
| exodeoxyribonuclease vii small subunit | SAMN04488094_10936 | Not Available | Negative | 3037802 - 3038044 | 8731.35 |
| acetoin utilization deacetylase acuc | SAMN04488094_10937 | Not Available | Negative | 3038041 - 3038976 | 32917.9 |
| two-component system, ompr family, phosphate regulon response regulator ompr | SAMN04488094_10938 | Not Available | Negative | 3039047 - 3039769 | 26529.1 |
| dna-binding transcriptional regulator, marr family | SAMN04488094_10939 | Not Available | Negative | 3039766 - 3040278 | 19193.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
