Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinol-cytochrome c reductase iron-sulfur subunit | SAMN04488094_10920 | Not Available | Positive | 3019398 - 3019976 | 20368.9 |
| ubiquinol-cytochrome c reductase cytochrome b subunit | SAMN04488094_10921 | Not Available | Positive | 3019988 - 3021331 | 50761.5 |
| ubiquinol-cytochrome c reductase cytochrome c1 subunit | SAMN04488094_10922 | Not Available | Positive | 3021351 - 3022139 | 28573.9 |
| membrane-bound lysozyme-inhibitor of c-type lysozyme | SAMN04488094_10923 | Not Available | Positive | 3022296 - 3022910 | 22460.0 |
| uncharacterized membrane protein | SAMN04488094_10924 | Not Available | Positive | 3023019 - 3023945 | 32273.5 |
| protein of unknown function | SAMN04488094_10925 | Not Available | Positive | 3024108 - 3026063 | 71580.3 |
| hypothetical protein | SAMN04488094_10926 | Not Available | Positive | 3026224 - 3026973 | 26174.7 |
| chorismate synthase | SAMN04488094_10927 | Not Available | Positive | 3027072 - 3028175 | 38774.1 |
| threonine/homoserine efflux transporter rhta | SAMN04488094_10928 | Not Available | Negative | 3028307 - 3029203 | 30965.2 |
| dna-binding protein hu-beta | SAMN04488094_10929 | Not Available | Negative | 3029411 - 3029701 | 10098.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
