Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SAMN04488094_10910 | Not Available | Negative | 3012818 - 3013453 | 24581.0 |
| hypothetical protein | SAMN04488094_10911 | Not Available | Positive | 3013576 - 3013785 | 7904.65 |
| hypothetical protein | SAMN04488094_10912 | Not Available | Positive | 3013796 - 3013969 | 6383.44 |
| site-specific recombinase xerd | SAMN04488094_10913 | Not Available | Positive | 3013954 - 3015081 | 41837.8 |
| Trna-lys | Not Available | Not Available | Positive | 3015089 - 3015164 | Not Available |
| diaminopimelate epimerase | SAMN04488094_10915 | Not Available | Positive | 3015252 - 3016106 | 30336.0 |
| threonylcarbamoyladenosine trna methylthiotransferase mtab | SAMN04488094_10916 | Not Available | Positive | 3016103 - 3017365 | 46510.0 |
| glutathione s-transferase | SAMN04488094_10917 | Not Available | Positive | 3017474 - 3018094 | 22761.3 |
| hypothetical protein | SAMN04488094_10918 | Not Available | Negative | 3018091 - 3018303 | 7682.98 |
| lipid a oxidase | SAMN04488094_10919 | Not Available | Negative | 3018445 - 3019101 | 24189.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
