Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylhomocysteinase | SAMN04488094_108192 | Not Available | Positive | 3002957 - 3004378 | 51960.4 |
| transposase, is5 family | SAMN04488094_1091 | Not Available | Negative | 3004379 - 3004646 | 10462.6 |
| protein of unknown function | SAMN04488094_1092 | Not Available | Positive | 3004996 - 3005559 | 21378.7 |
| hypothetical protein | SAMN04488094_1093 | Not Available | Positive | 3005559 - 3006203 | 24611.2 |
| jab domain-containing protein | SAMN04488094_1094 | Not Available | Negative | 3006692 - 3008086 | 50777.2 |
| multiubiquitin | SAMN04488094_1095 | Not Available | Negative | 3008083 - 3009192 | 40785.4 |
| transcriptional regulator, contains xre-family hth domain | SAMN04488094_1096 | Not Available | Positive | 3009348 - 3009728 | 13853.4 |
| protein of unknown function | SAMN04488094_1097 | Not Available | Positive | 3009731 - 3010657 | 34439.3 |
| hypothetical protein | SAMN04488094_1098 | Not Available | Positive | 3010797 - 3011594 | 29213.0 |
| hypothetical protein | SAMN04488094_1099 | Not Available | Positive | 3011591 - 3012517 | 33922.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
