Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04488094_108182 | Not Available | Positive | 2988772 - 2990220 | 51489.1 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN04488094_108183 | Not Available | Negative | 2990165 - 2990962 | 28771.3 |
| sugar o-acyltransferase, sialic acid o-acetyltransferase neud family | SAMN04488094_108184 | Not Available | Positive | 2991396 - 2992019 | 21261.0 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04488094_108185 | Not Available | Negative | 2992051 - 2993211 | 42014.3 |
| udp-glucose 4-epimerase | SAMN04488094_108186 | Not Available | Negative | 2993208 - 2994203 | 36533.9 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04488094_108187 | Not Available | Negative | 2994200 - 2995327 | 40518.2 |
| predicted dehydrogenase | SAMN04488094_108188 | Not Available | Negative | 2995328 - 2996344 | 37262.6 |
| transferase hexapeptide (six repeat-containing protein) | SAMN04488094_108189 | Not Available | Negative | 2996341 - 2996865 | 18254.7 |
| parallel beta-helix repeat (two copies) | SAMN04488094_108190 | Not Available | Negative | 2997172 - 3000282 | 106311.0 |
| methionine adenosyltransferase | SAMN04488094_108191 | Not Available | Positive | 3001744 - 3002925 | 42016.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
