Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylglycerophosphate synthase | SAMN04488094_108162 | Not Available | Negative | 2963442 - 2964110 | 23457.0 |
| cytochrome b561 | SAMN04488094_108163 | Not Available | Positive | 2964291 - 2964839 | 20205.5 |
| hypothetical protein | SAMN04488094_108164 | Not Available | Positive | 2965019 - 2965213 | 7362.92 |
| voltage-gated potassium channel | SAMN04488094_108165 | Not Available | Negative | 2965247 - 2966008 | 28613.4 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN04488094_108166 | Not Available | Negative | 2966173 - 2967204 | 37256.0 |
| spermidine/putrescine transport system permease protein | SAMN04488094_108167 | Not Available | Negative | 2967204 - 2967983 | 27900.8 |
| spermidine/putrescine transport system permease protein | SAMN04488094_108168 | Not Available | Negative | 2967980 - 2968843 | 31058.1 |
| spermidine/putrescine transport system substrate-binding protein | SAMN04488094_108169 | Not Available | Negative | 2968854 - 2969885 | 37637.9 |
| sugar or nucleoside kinase, ribokinase family | SAMN04488094_108170 | Not Available | Negative | 2969920 - 2970822 | 30236.2 |
| adp-ribosylglycohydrolase | SAMN04488094_108171 | Not Available | Negative | 2970837 - 2971880 | 35092.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
