Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_108152 | Not Available | Negative | 2950930 - 2952099 | 43370.1 |
| hypothetical protein | SAMN04488094_108153 | Not Available | Positive | 2952437 - 2953192 | 29137.9 |
| hypothetical protein | SAMN04488094_108154 | Not Available | Positive | 2953240 - 2954226 | 37687.9 |
| di-and tricarboxylate transporter | SAMN04488094_108155 | Not Available | Positive | 2954553 - 2956334 | 62445.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488094_108156 | Not Available | Negative | 2956350 - 2957408 | 37751.3 |
| abc-type nitrate/sulfonate/bicarbonate transport system, permease component | SAMN04488094_108157 | Not Available | Negative | 2957405 - 2958997 | 54511.8 |
| nitt/taut family transport system atp-binding protein | SAMN04488094_108158 | Not Available | Negative | 2958994 - 2959797 | 28237.6 |
| abc-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein | SAMN04488094_108159 | Not Available | Negative | 2959787 - 2960785 | 35387.3 |
| uncharacterized membrane protein ybhn, upf0104 family | SAMN04488094_108160 | Not Available | Negative | 2960840 - 2961805 | 32975.2 |
| hypothetical protein | SAMN04488094_108161 | Not Available | Negative | 2961808 - 2963427 | 57923.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
