Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside abc transporter membrane protein | SAMN04488094_108132 | Not Available | Positive | 2931083 - 2932186 | 38910.8 |
| simple sugar transport system permease protein | SAMN04488094_108133 | Not Available | Positive | 2932190 - 2933158 | 34021.4 |
| hypothetical protein | SAMN04488094_108134 | Not Available | Positive | 2933253 - 2934173 | 32380.5 |
| conserved hypothetical protein | SAMN04488094_108135 | Not Available | Positive | 2934170 - 2934934 | 27680.3 |
| transcriptional regulator, asnc family | SAMN04488094_108136 | Not Available | Negative | 2934968 - 2935468 | 18468.2 |
| thioredoxin reductase (nadph) | SAMN04488094_108137 | Not Available | Positive | 2935632 - 2936672 | 36795.7 |
| sulfate adenylyltransferase | SAMN04488094_108138 | Not Available | Positive | 2936940 - 2938652 | 64128.4 |
| lsu ribosomal protein l9p | SAMN04488094_108139 | Not Available | Negative | 2938860 - 2939483 | 22417.2 |
| ssu ribosomal protein s18p | SAMN04488094_108140 | Not Available | Negative | 2939496 - 2939723 | 8722.89 |
| ssu ribosomal protein s6p | SAMN04488094_108141 | Not Available | Negative | 2939753 - 2940109 | 13809.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
