Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, duf1330 family | SAMN04488094_10891 | Not Available | Negative | 2884468 - 2884755 | 10452.2 |
| alanyl-trna synthetase | SAMN04488094_10892 | Not Available | Negative | 2884757 - 2887417 | 95935.1 |
| uncharacterized membrane protein yqha | SAMN04488094_10893 | Not Available | Negative | 2887496 - 2888101 | 22685.1 |
| recombination protein reca | SAMN04488094_10894 | Not Available | Negative | 2888235 - 2889308 | 38292.9 |
| two-component system, cell cycle sensor histidine kinase and response regulator ccka | SAMN04488094_10895 | Not Available | Negative | 2889646 - 2891970 | 83348.0 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN04488094_10896 | Not Available | Negative | 2892088 - 2893254 | 41886.4 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN04488094_10897 | Not Available | Negative | 2893334 - 2894212 | 32340.4 |
| uncharacterized conserved protein, circularly permuted atpgrasp superfamily | SAMN04488094_10898 | Not Available | Negative | 2894221 - 2896590 | 86368.3 |
| uncharacterized conserved protein, duf2126 family | SAMN04488094_10899 | Not Available | Negative | 2896606 - 2899959 | 124713.0 |
| formyltetrahydrofolate deformylase | SAMN04488094_108100 | Not Available | Positive | 2900240 - 2901124 | 32842.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
