Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-precorrin 5a hydrolase / precorrin-3b c17-methyltransferase | SAMN04488094_10860 | Not Available | Negative | 2854194 - 2856002 | 61856.2 |
| precorrin-2/cobalt-factor-2 c20-methyltransferase | SAMN04488094_10861 | Not Available | Negative | 2855995 - 2856693 | 24666.9 |
| precorrin-6y c5,15-methyltransferase (decarboxylating) | SAMN04488094_10862 | Not Available | Negative | 2856690 - 2857883 | 42433.2 |
| precorrin-8x methylmutase | SAMN04488094_10863 | Not Available | Negative | 2857880 - 2858620 | 25447.6 |
| sirohydrochlorin cobaltochelatase | SAMN04488094_10864 | Not Available | Negative | 2858617 - 2859759 | 41806.2 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN04488094_10865 | Not Available | Positive | 2860030 - 2860698 | 22866.5 |
| cobalt/nickel transport protein | SAMN04488094_10867 | Not Available | Positive | 2861132 - 2861923 | 28263.6 |
| cobalt/nickel transport system permease protein | SAMN04488094_10868 | Not Available | Positive | 2861927 - 2862544 | 20770.0 |
| nickel transport protein | SAMN04488094_10869 | Not Available | Positive | 2862541 - 2863152 | 20511.5 |
| cobalt/nickel transport system permease protein | SAMN04488094_10870 | Not Available | Positive | 2863149 - 2863943 | 28586.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
