Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cob(i)alamin adenosyltransferase | SAMN04488094_10849 | Not Available | Negative | 2841918 - 2842526 | 22612.6 |
| tigr00659 family protein | SAMN04488094_10850 | Not Available | Negative | 2842537 - 2843253 | 24371.3 |
| putative effector of murein hydrolase lrga, upf0299 family | SAMN04488094_10851 | Not Available | Negative | 2843250 - 2843618 | 12520.1 |
| cobaltochelatase cobn subunit | SAMN04488094_10852 | Not Available | Negative | 2843740 - 2847549 | 136823.0 |
| cobalamin biosynthesis protein cobw | SAMN04488094_10853 | Not Available | Negative | 2847744 - 2848829 | 38919.7 |
| precorrin-6a reductase | SAMN04488094_10855 | Not Available | Negative | 2849125 - 2849874 | 26148.4 |
| cobalt-precorrin-5b (c1)-methyltransferase | SAMN04488094_10856 | Not Available | Negative | 2849886 - 2850974 | 36796.2 |
| uroporphyrin-iii c-methyltransferase | SAMN04488094_10857 | Not Available | Positive | 2851081 - 2852022 | 33681.9 |
| cobyrinic acid a,c-diamide synthase | SAMN04488094_10858 | Not Available | Positive | 2852019 - 2853308 | 44368.2 |
| precorrin-4/cobalt-precorrin-4 c11-methyltransferase | SAMN04488094_10859 | Not Available | Negative | 2853433 - 2854197 | 27022.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
