Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | SAMN04488094_10839 | Not Available | Positive | 2834391 - 2834708 | 11587.2 |
| hypothetical protein | SAMN04488094_10840 | Not Available | Positive | 2834705 - 2834836 | 4436.14 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04488094_10841 | Not Available | Positive | 2834943 - 2835893 | 34844.9 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN04488094_10842 | Not Available | Positive | 2835898 - 2836413 | 19060.4 |
| 3-(3-hydroxy-phenyl)propionate hydroxylase | SAMN04488094_10843 | Not Available | Positive | 2836477 - 2838111 | 61160.1 |
| protein of unknown function | SAMN04488094_10844 | Not Available | Positive | 2838108 - 2838308 | 6939.22 |
| fumarylacetoacetate hydrolase | SAMN04488094_10845 | Not Available | Positive | 2838418 - 2839662 | 44541.7 |
| predicted metal-binding protein | SAMN04488094_10846 | Not Available | Positive | 2839730 - 2840092 | 12519.7 |
| adenosylcobyric acid synthase (glutamine-hydrolysing) | SAMN04488094_10847 | Not Available | Negative | 2840196 - 2841653 | 51392.7 |
| yrhk-like protein | SAMN04488094_10848 | Not Available | Negative | 2841655 - 2841918 | 10169.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
